Index

Symbols

``-output_ports`` Module registry ``_input_ports`` Module registry ``_modules`` Module registry ``add_input_port`` Module registry ``add_Module`` Module registry ``add_output_port`` Module registry ``addInputPort`` Module registry, [1]

``addModule`` Module registry, [1] ``addOutputPort`` Module registry, [1] ``ConfigurationObject`` ``filePool`` packages ``initialize`` packages, [1], [2] ``ModuleError`` modules, [1], [2]

A

adding connections modules, [1] ports spreadsheet sheets tags adding parameters parameter exploration aliases mashups

analogy visual diff animation, [1] annotations versions

B

basic modules batch mode

builder, [1] by example queries

C

caching modules cells creating, spreadsheet positioning, spreadsheet spreadsheet, [1] web browser, spreadsheet center changing parameters close vistrail color modules columns spreadsheet command line arguments comparing versions

configuration packages configuration directory configuring aliases mashups connecting modules connections adding definition selecting control flow parameter exploration control flow assistant creating spreadsheet cells

D

database, [1] issues opening from saving to setup default values ports spreadsheet definition connections modules vistrail deleting modules ports spreadsheet sheets tags dependencies packages

diff see versions, comparing differences parameters directions parameter exploration docking spreadsheet sheets dynamic modules

E

editing spreadsheet modes execute

exploring parameters, [1]

F

from a database open

G

grouping modules

groups subworkflows, [1]

H

history

I

image spreadsheet saving input persistent files input dependency ports

interactive spreadsheet modes intermediate persistent files issues database

L

labels modules ports layout spreadsheet legend

list of examples modules location view log

M

mashups aliases configuring aliases naming saving setting parameters merging methods modes editing, spreadsheet interactive, spreadsheet spreadsheet

module connectivity ports Module registry ``-output_ports`` ``_input_ports`` ``_modules`` ``addInputPort``, [1] ``addModule``, [1] ``addOutputPort``, [1] ``add_Module`` ``add_input_port`` ``add_output_port`` modules ``ModuleError``, [1], [2] adding, [1] basic caching color connecting definition deleting dynamic grouping labels list of examples namespaces packages parameters ports selecting shape subworkflows, [1] ungrouping visibility writing new multiple inputs ports

N

namespaces modules naming mashups navigating versions

non-interactive mode notes

O

open from a database vistrail opening from database optional ports

ordering spreadsheet sheets output persistent files

P

packages ``filePool`` ``initialize``, [1], [2] configuration dependencies modules ports temporary files wrapping command-line tools palette views pan parameter exploration, [1] adding parameters control flow directions running setting values spreadsheet, [1], [2] parameters changing differences exploring, [1] modules persistent files input intermediate output

port shortcut port types ports ports adding default values deleting input dependency labels module connectivity modules multiple inputs optional packages port types positioning spreadsheet cells PythonSource

Q

queries, [1] by example textual viewing results

R

redo, [1] RichTextCell spreadsheet

rows spreadsheet running parameter exploration

S

save vistrail saving image, spreadsheet mashups spreadsheet saving to database search refine select selecting connections modules server, [1] setting parameters mashups

setting values parameter exploration setup database shape modules sheets adding, spreadsheet deleting, spreadsheet docking, spreadsheet ordering, spreadsheet shortcut port spreadsheet, [1] RichTextCell cells, [1] cells creating cells positioning cells web browser columns default values layout modes modes editing modes interactive parameter exploration, [1], [2] rows saving saving image sheets adding sheets deleting sheets docking sheets ordering virtual cell subworkflows groups, [1] modules, [1]

T

tab tags adding deleting upgrading temporary files packages

textual queries toolbar

U

undo, [1] ungrouping modules

upgrading tags

V

versions, [1] annotations comparing navigating viewing view location viewing versions viewing results queries views palette virtual cell spreadsheet

visibility modules vistrail close definition open save VisTrails VTK modules visual diff analogy see versions, comparing vtkInteractionHandler

W

web browser spreadsheet cells workflow wrapping command line tools using package CLTools

wrapping command-line tools packages writing new modules

Z

zoom