Index

Symbols | _ | A | B | C | D | E | F | G | H | I | L | M | N | O | P | Q | R | S | T | U | V | W | Z

Symbols

``_input_ports``
modules, [1], [2]
``_modules``
packages, [1]
``_output_ports``
modules, [1], [2]
``compute``
modules
``ConfigurationObject``
``filePool``
packages
``identifier``
packages, [1]
``ModuleError``
modules, [1], [2]
``name``
packages, [1]
``version``
packages, [1]

_

_input_ports (vistrails.core.modules.vistrails_module.Module attribute)
_output_ports (vistrails.core.modules.vistrails_module.Module attribute)
_settings (vistrails.core.modules.vistrails_module.Module attribute)

A

abstract
modules
abstract (vistrails.core.modules.config.ModuleSettings attribute)
adding
connections
modules, [1]
ports
spreadsheet sheets
tags
adding parameters
parameter exploration
aliases
mashups
analogy
visual diff
animation, [1]
annotate() (vistrails.core.modules.vistrails_module.Module method)
annotations
versions

B

basic
modules
batch mode
builder, [1]
by example
queries

C

caching
modules
cardinality
ports
cells
creating, spreadsheet
positioning, spreadsheet
spreadsheet, [1]
web browser, spreadsheet
center
changing
parameters
check_input() (vistrails.core.modules.vistrails_module.Module method)
close
vistrail
color
modules
color (vistrails.core.modules.config.ModuleSettings attribute)
columns
spreadsheet
command line arguments
comparing
versions
CompoundInputPort (class in vistrails.core.modules.config)
CompoundOutputPort (class in vistrails.core.modules.config)
compute() (vistrails.core.modules.vistrails_module.Module method)
configuration
modules
packages
configuration directory
configure_widget (vistrails.core.modules.config.ModuleSettings attribute)
configuring aliases
mashups
connecting
modules
connections
adding
definition
selecting
connectivity
ports
constant_signature (vistrails.core.modules.config.ModuleSettings attribute)
constant_widget (vistrails.core.modules.config.ModuleSettings attribute)
constant_widgets (vistrails.core.modules.config.ModuleSettings attribute)
ConstantWidgetConfig (class in vistrails.core.modules.config)
control flow
parameter exploration
control flow assistant
creating
spreadsheet cells
customization
modules

D

database, [1]
issues
opening from
saving to
setup
default (vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.InputPortItem attribute)
default values
ports
spreadsheet
defaults (vistrails.core.modules.config.CompoundInputPort attribute)
definition
connections
modules
vistrail
deleting
modules
ports
spreadsheet sheets
tags
dependencies
packages
depth (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.OutputPort attribute)
diff
see versions, comparing
differences
parameters
directions
parameter exploration
docking
spreadsheet sheets
docstring (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.OutputPort attribute)
dynamic
modules

E

editing
spreadsheet modes
entry_type (vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.InputPortItem attribute)
entry_types (vistrails.core.modules.config.CompoundInputPort attribute)
execute
exploring
parameters, [1]

F

force_get_input() (vistrails.core.modules.vistrails_module.Module method)
force_get_input_list() (vistrails.core.modules.vistrails_module.Module method)
fringe (vistrails.core.modules.config.ModuleSettings attribute)
from a database
open

G

get_input() (vistrails.core.modules.vistrails_module.Module method)
get_input_list() (vistrails.core.modules.vistrails_module.Module method)
ghost_namespace (vistrails.core.modules.config.ModuleSettings attribute)
ghost_package (vistrails.core.modules.config.ModuleSettings attribute)
ghost_package_version (vistrails.core.modules.config.ModuleSettings attribute)
grouping
modules
groups
subworkflows, [1]

H

has_input() (vistrails.core.modules.vistrails_module.Module method)
hide_descriptor (vistrails.core.modules.config.ModuleSettings attribute)
hide_namespace (vistrails.core.modules.config.ModuleSettings attribute)
history

I

image
spreadsheet saving
InputPort (class in vistrails.core.modules.config)
InputPortItem (class in vistrails.core.modules.config)
interactive
spreadsheet modes
is_root (vistrails.core.modules.config.ModuleSettings attribute)
issues
database
items (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)

L

label (vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.InputPortItem attribute)
labels
modules
ports
labels (vistrails.core.modules.config.CompoundInputPort attribute)
layout
spreadsheet
left_fringe (vistrails.core.modules.config.ModuleSettings attribute)
legend
list of examples
modules
location
view
log

M

mashups
aliases
configuring aliases
naming
saving
setting parameters
max_conns (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.OutputPort attribute)
merging
methods
min_conns (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.OutputPort attribute)
modes
editing, spreadsheet
interactive, spreadsheet
spreadsheet
Module (class in vistrails.core.modules.vistrails_module)
ModuleError (class in vistrails.core.modules.vistrails_module)
modules
``ModuleError``, [1], [2]
``_input_ports``, [1], [2]
``_output_ports``, [1], [2]
``compute``
abstract
adding, [1]
basic
caching
color
configuration
connecting
customization
definition
deleting
dynamic
grouping
labels
list of examples
namespaces
parameters
ports
selecting
shape
subworkflows, [1]
ungrouping
visibility
widgets
writing new
ModuleSettings (class in vistrails.core.modules.config)

N

name (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.ModuleSettings attribute)
(vistrails.core.modules.config.OutputPort attribute)
namespace (vistrails.core.modules.config.ModuleSettings attribute)
namespaces
modules
naming
mashups
navigating
versions
non-interactive mode
notes

O

open
from a database
vistrail
opening from
database
optional
ports
optional (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.OutputPort attribute)
ordering
spreadsheet sheets
OutputPort (class in vistrails.core.modules.config)
OutputPortItem (class in vistrails.core.modules.config)

P

package
upgrades
package (vistrails.core.modules.config.ModuleSettings attribute)
package_version (vistrails.core.modules.config.ModuleSettings attribute)
packages
``_modules``, [1]
``filePool``
``identifier``, [1]
``name``, [1]
``version``, [1]
configuration
dependencies
ports
temporary files
wrapping command-line tools
palette
views
pan
parameter exploration, [1]
adding parameters
control flow
directions
running
setting values
spreadsheet, [1], [2], [3]
parameter widgets
parameters
changing
differences
exploring, [1]
modules
ParamExpWidgetConfig (class in vistrails.core.modules.config)
ports, [1]
adding
cardinality
connectivity
default values
deleting
labels
modules
optional
packages
shape
signatures
variant
positioning
spreadsheet cells
PythonSource

Q

queries, [1]
by example
textual
viewing results
QueryWidgetConfig (class in vistrails.core.modules.config)

R

redo, [1]
RichTextCell
spreadsheet
right_fringe (vistrails.core.modules.config.ModuleSettings attribute)
rows
spreadsheet
running
parameter exploration

S

save
vistrail
saving
image, spreadsheet
mashups
spreadsheet
saving parameter exploration
spreadsheet
saving to
database
search
refine
select
selecting
connections
modules
server, [1]
set_output() (vistrails.core.modules.vistrails_module.Module method)
setting parameters
mashups
setting values
parameter exploration
setup
database
shape
modules
ports
shape (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.OutputPort attribute)
sheets
adding, spreadsheet
deleting, spreadsheet
docking, spreadsheet
ordering, spreadsheet
signature (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.InputPortItem attribute)
(vistrails.core.modules.config.ModuleSettings attribute)
(vistrails.core.modules.config.OutputPort attribute)
(vistrails.core.modules.config.OutputPortItem attribute)
signatures
ports
sort_key (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.CompoundOutputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.OutputPort attribute)
spreadsheet, [1]
RichTextCell
cells, [1]
cells creating
cells positioning
cells web browser
columns
default values
layout
modes
modes editing
modes interactive
parameter exploration, [1], [2], [3]
rows
saving
saving image
saving parameter exploration
sheets adding
sheets deleting
sheets docking
sheets ordering
virtual cell
subworkflows
groups, [1]
modules, [1]

T

tab
tags
adding
deleting
upgrading
temporary files
packages
textual
queries
toolbar

U

undo, [1]
ungrouping
modules
upgrades
package
upgrading
tags

V

values (vistrails.core.modules.config.CompoundInputPort attribute)
(vistrails.core.modules.config.InputPort attribute)
(vistrails.core.modules.config.InputPortItem attribute)
variant
ports
version (vistrails.core.modules.config.ModuleSettings attribute)
versions, [1]
annotations
comparing
navigating
viewing
view
location
viewing
versions
viewing results
queries
views
palette
virtual cell
spreadsheet
visibility
modules
vistrail
close
definition
open
save
VisTrails VTK modules
vistrails.core.modules.config (module)
vistrails.core.modules.config.CIPort (class in vistrails.core.modules.config)
vistrails.core.modules.config.COPort (class in vistrails.core.modules.config)
vistrails.core.modules.config.IPItem (class in vistrails.core.modules.config)
vistrails.core.modules.config.IPort (class in vistrails.core.modules.config)
vistrails.core.modules.config.OPItem (class in vistrails.core.modules.config)
vistrails.core.modules.config.OPort (class in vistrails.core.modules.config)
vistrails.core.modules.vistrails_module (module)
visual diff
analogy
see versions, comparing
vtkInteractionHandler

W

web browser
spreadsheet cells
widget (vistrails.core.modules.config.ConstantWidgetConfig attribute)
(vistrails.core.modules.config.ParamExpWidgetConfig attribute)
(vistrails.core.modules.config.QueryWidgetConfig attribute)
widget_type (vistrails.core.modules.config.ConstantWidgetConfig attribute)
(vistrails.core.modules.config.ParamExpWidgetConfig attribute)
(vistrails.core.modules.config.QueryWidgetConfig attribute)
widget_use (vistrails.core.modules.config.ConstantWidgetConfig attribute)
(vistrails.core.modules.config.ParamExpWidgetConfig attribute)
(vistrails.core.modules.config.QueryWidgetConfig attribute)
widgets
modules
workflow
wrapping command line tools using package CLTools
wrapping command-line tools
packages
writing new
modules

Z

zoom